ctgt: Closed Testing with Globaltest for Pathway Analysis

A shortcut procedure is proposed to implement closed testing for large-scale multiple testings, especially with the global test. This shortcut is asymptotically equivalent to closed testing and post hoc. Users could detect any possible sets of features or pathways with family-wise error rate controlled. The global test is powerful to detect associations between a group of features and an outcome of interest.

Version: 2.0.1
Imports: Rcpp (≥ 1.0.3)
LinkingTo: Rcpp, BH
Published: 2024-01-16
DOI: 10.32614/CRAN.package.ctgt
Author: Ningning Xu
Maintainer: Ningning Xu <ningningxu312 at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
CRAN checks: ctgt results


Reference manual: ctgt.pdf


Package source: ctgt_2.0.1.tar.gz
Windows binaries: r-devel: ctgt_2.0.1.zip, r-release: ctgt_2.0.1.zip, r-oldrel: ctgt_2.0.1.zip
macOS binaries: r-release (arm64): ctgt_2.0.1.tgz, r-oldrel (arm64): ctgt_2.0.1.tgz, r-release (x86_64): ctgt_2.0.1.tgz, r-oldrel (x86_64): ctgt_2.0.1.tgz
Old sources: ctgt archive

Reverse dependencies:

Reverse depends: newFocus


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